STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44074.1COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bvu:BVU_4126 putative outer membrane protein; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein. (456 aa)    
Predicted Functional Partners:
ADV44076.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: bvu:BVU_4124 putative lipoprotein; PFAM: secretion protein HlyD family protein; SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.955
ADV44075.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: bvu:BVU_4125 AcrB/AcrD/AcrF family transporter; PFAM: acriflavin resistance protein; SPTR: Putative uncharacterized protein; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.935
ADV43374.1
Phosphate-selective porin O and P; InterPro IPR010870; KEGG: bth:BT_2477 hypothetical protein; PFAM: phosphate-selective porin O and P; SPTR: Putative uncharacterized protein; PFAM: Phosphate-selective porin O and P.
  
     0.659
ADV43371.1
KEGG: bth:BT_2480 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.644
ADV42139.1
Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: bfs:BF3760 hypothetical protein; PFAM: secretion protein HlyD family protein; SPTR: Putative uncharacterized protein; PFAM: HlyD family secretion protein.
  
 
 0.630
ADV43359.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: bfr:BF3152 putative cation efflux system protein; PFAM: secretion protein HlyD family protein; SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.544
ADV43372.1
Peptidase M75, Imelysin; InterPro IPR018976; KEGG: bth:BT_2479 iron-regulated protein A precursor; PFAM: Peptidase M75, Imelysin; SPTR: Putative uncharacterized protein; PFAM: Imelysin.
  
     0.540
ADV43013.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bth:BT_1468 putative outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: Outer membrane efflux protein; PFAM: Outer membrane efflux protein.
  
     0.514
ADV44955.1
TonB-dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: bfr:BF4297 putative TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Putative uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
   
 0.504
ADV44990.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023: IPR006549; KEGG: bfs:BF3121 putative lipopolysaccharide biosynthesis-related protein; SPTR: Putative uncharacterized protein; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA.
  
     0.496
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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