STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44085.1Cytidyltransferase-related domain protein; COGs: COG0615 Cytidylyltransferase; InterPro IPR007074: IPR004820: IPR004821; KEGG: pru:PRU_1767 glycerophosphoryl diester phosphodiesterase/cytidylyltransferase family protein; PFAM: cytidylyltransferase; LicD family protein; SPTR: Glycerophosphoryl diester phosphodiesterase/cytidylyltransferase family protein; TIGRFAM: cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: glycerol-3-phosphate cytidylyltransferase; cytidyltransferase-related domain. (378 aa)    
Predicted Functional Partners:
ADV44090.1
CDP- glycerol:poly(glycerophosphate)glycerophosphotransferase; COGs: COG1887 Putative glycosyl/glycerophosphate transferase involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC; InterPro IPR007577: IPR007554; KEGG: cpe:CPE0482 glycero-phosphotransferase; PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; glycosyltransferase sugar-binding region containing DXD motif; SPTR: CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase; PFAM: Glycosyltransferase sugar-binding region containing DXD motif; CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase.
 
  
 0.870
ADV44086.1
Phosphoglycerate mutase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: dsy:DSY1979 alpha-ribazole-5-phosphate phosphatase; PFAM: Phosphoglycerate mutase; SPTR: Putative uncharacterized protein; PFAM: Phosphoglycerate mutase family.
       0.766
ADV44087.1
InterPro IPR007525: IPR017896: IPR017900; KEGG: dps:DPPB80 related to F420H2-dehydrogenase, beta subunit; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; SPTR: Putative uncharacterized protein; PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.
       0.743
ADV44088.1
KEGG: esi:Exig_2626 polysaccharide biosynthesis protein; SPTR: EpsT.
       0.669
ADV44089.1
COGs: COG1794 Aspartate racemase; InterPro IPR015942: IPR004380: IPR018187; KEGG: hhe:HH0075 aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: Aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase.
     
 0.661
ADV44091.1
KEGG: amt:Amet_0211 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide pyruvyl transferase.
       0.651
ADV44093.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cpe:CPE0501 capsular polysaccharide biosynthsis protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase CpsJ; PFAM: Glycosyl transferase family 2.
  
  
 0.493
ADV44094.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bpo:BP951000_1254 glycosyltransferase/CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase; PFAM: Glycosyl transferase family 2.
  
  
 0.493
ADV44095.1
Glycosyl transferase family 2; InterPro IPR001173; KEGG: pdi:BDI_1839 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase family 2; PFAM: Glycosyl transferase family 2.
  
  
 0.480
ADV44092.1
Hypothetical protein; KEGG: lpl:lp_2101 polysaccharide polymerase; SPTR: Polysaccharide polymerase.
       0.457
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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