STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44098.1COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: nis:NIS_1249 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; SPTR: Putative uncharacterized protein; PFAM: Bacterial sugar transferase. (196 aa)    
Predicted Functional Partners:
ADV44099.1
DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: pdi:BDI_3641 putative aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Putative uncharacterized protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.722
ADV44412.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451: IPR018357: IPR020019; KEGG: bfs:BF0750 putative acetyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
  
 0.595
ADV44743.1
Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715: IPR019554; KEGG: bfs:BF1707 putative capsule polysaccharide export protein; PFAM: polysaccharide export protein; Soluble ligand binding domain; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
  
  
 0.544
ADV44096.1
KEGG: pti:PHATRDRAFT_42818 hypothetical protein; SPTR: Transposase.
       0.483
ADV44421.1
Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: mst:Msp_0066 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis protein.
 
  
 0.451
ADV44582.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: bfr:BF1995 putative glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Two-component system sensor histidine kinase/response regulator; PFAM: Glycosyl transferase family 2.
    
 0.422
ADV43001.1
COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835; KEGG: bfs:BF4125 putative mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Putative uncharacterized protein; PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.408
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.