STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44108.1KEGG: bfs:BF2636 hypothetical protein; SPTR: Putative uncharacterized protein. (232 aa)    
Predicted Functional Partners:
ADV44109.1
Peptidoglycan-binding lysin domain protein; InterPro IPR002482: IPR018392; KEGG: bfs:BF2635 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Putative uncharacterized protein; PFAM: LysM domain.
 
     0.885
ADV42438.1
KEGG: bth:BT_3578 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3316).
  
     0.751
ADV44810.1
KEGG: bfs:BF1652 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.750
ADV43442.1
KEGG: bfs:BF0849 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3256).
  
     0.749
ADV42072.1
KEGG: bfs:BF3669 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.744
ADV44792.1
Sporulation domain-containing protein; InterPro IPR007730; KEGG: bfs:BF1670 hypothetical protein; PFAM: Sporulation domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Sporulation related domain.
  
   
 0.741
ADV42350.1
KEGG: bfs:BF0451 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.739
ADV43461.1
KEGG: bfs:BF0922 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.729
ADV42781.1
KEGG: bfs:BF0074 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.713
ADV43654.1
WD40-like beta Propeller containing protein; InterPro IPR013026: IPR011659; KEGG: bfs:BF1145 hypothetical protein; PFAM: WD40-like beta Propeller containing protein; SPTR: Putative uncharacterized protein.
  
    0.712
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.