STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44112.1Amino acid/peptide transporter; COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR000109: IPR005279: IPR018456; KEGG: bth:BT_0580 putative H+/peptide symporter; PFAM: TGF-beta receptor type I/II extracellular region; SPTR: Putative uncharacterized protein; TIGRFAM: amino acid/peptide transporter; PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial. (520 aa)    
Predicted Functional Partners:
ADV44111.1
ybaK/ebsC protein; COGs: COG2606 conserved hypothetical protein; InterPro IPR007214: IPR004369; KEGG: bth:BT_0579 putative transcription regulator; PFAM: YbaK/prolyl-tRNA synthetase associated region; SPTR: YbaK/EbsC family protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein.
       0.725
ADV44110.1
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.690
ADV44108.1
KEGG: bfs:BF2636 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.590
ADV44109.1
Peptidoglycan-binding lysin domain protein; InterPro IPR002482: IPR018392; KEGG: bfs:BF2635 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Putative uncharacterized protein; PFAM: LysM domain.
       0.535
ADV43154.1
Endothelin-converting enzyme; COGs: COG3590 metalloendopeptidase; InterPro IPR008753: IPR018497; KEGG: bfr:BF4102 putative endothelin-converting enzyme; PFAM: peptidase M13; Peptidase M13, neprilysin-like; PRIAM: Neprilysin; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M13.
 
  
 0.506
ADV42420.1
COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: bfr:BF0437 sodium/iodide co-transporter; PFAM: Na+/solute symporter; SPTR: Putative uncharacterized protein; PFAM: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.504
ADV43550.1
Major facilitator superfamily MFS_1; InterPro IPR011701; KEGG: bfs:BF1002 putative transmembrane transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Putative uncharacterized protein; PFAM: Major Facilitator Superfamily.
 
  
 0.426
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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