STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44160.1Helix-turn-helix, AraC domain protein; InterPro IPR018060; KEGG: bvu:BVU_2189 transcriptional regulator; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator. (289 aa)    
Predicted Functional Partners:
ADV42744.1
KEGG: bfr:BF2124 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3575).
  
     0.681
ADV43897.1
KEGG: bth:BT_4234 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3575).
  
     0.679
ADV44458.1
Hypothetical protein; InterPro IPR002143; KEGG: bth:BT_1485 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: AhpC/TSA family.
  
     0.593
ADV42197.1
KEGG: bfs:BF1730 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.570
ADV43767.1
DNA binding domain protein, excisionase family; InterPro IPR010093; KEGG: bvu:BVU_2478 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.
  
     0.549
ADV42914.1
KEGG: pdi:BDI_2142 mobilization protein; SPTR: Mobilization protein.
  
     0.534
ADV42213.1
KEGG: bfs:BF1794 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.489
ADV43983.1
InterPro IPR002842; KEGG: bth:BT_1301 ATP synthase subunit E; PFAM: H+transporting two-sector ATPase E subunit; SPTR: Putative uncharacterized protein; PFAM: ATP synthase B/B' CF(0).
  
     0.485
ADV42196.1
DNA binding domain protein, excisionase family; InterPro IPR010093; KEGG: bfs:BF1729 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA binding domain protein, excisionase family; manually curated; TIGRFAM: DNA binding domain, excisionase family.
  
     0.482
ADV43896.1
KEGG: bth:BT_4233 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: OmpA family.
  
     0.476
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.