STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44172.1Protein of unknown function DUF1573; InterPro IPR011467; KEGG: bfs:BF2093 hypothetical protein; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573). (131 aa)    
Predicted Functional Partners:
ADV44173.1
Precorrin-2 C20-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway.
       0.705
ADV43259.1
KEGG: bfs:BF0694 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.659
ADV42917.1
KEGG: bth:BT_2796 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial membrane protein YfhO.
  
     0.656
ADV42517.1
KEGG: bth:BT_3427 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF3109).
  
     0.611
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.605
ADV42791.1
KEGG: bth:BT_3247 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2723).
  
     0.598
ADV44171.1
Oligopeptide transporter, OPT family; COGs: COG1297 membrane protein; InterPro IPR004813: IPR004814; KEGG: bth:BT_1086 putative oligopeptide transporter; PFAM: Oligopeptide transporter OPT superfamily protein; SPTR: Putative uncharacterized protein; TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: OPT oligopeptide transporter protein; TIGRFAM: oligopeptide transporters, OPT superfamily; putative oligopeptide transporter, OPT family.
       0.595
ADV43061.1
KEGG: bth:BT_2732 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3467).
  
     0.580
ADV43158.1
Rod shape-determining protein MreD; InterPro IPR007227; KEGG: bfr:BF4098 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD.
  
     0.565
ADV42941.1
Endonuclease/exonuclease/phosphatase; InterPro IPR005135; KEGG: bfs:BF4223 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Putative uncharacterized protein; PFAM: Endonuclease/Exonuclease/phosphatase family.
  
     0.558
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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