STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44209.1InterPro IPR001296; KEGG: cce:Ccel_2930 TPR/glycosyl transferase domain-containing protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1. (389 aa)    
Predicted Functional Partners:
ADV44208.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: eci:UTI89_C2306 putative rhamnosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Putative rhamnosyltransferase; PFAM: Glycosyl transferase family 2.
  
    0.785
ADV44207.1
Hypothetical protein; KEGG: mtp:Mthe_0963 putative transmembrane protein; SPTR: Putative transmembrane protein.
       0.773
ADV44210.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfr:BF3915 putative glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferases group 1.
       0.773
ADV44211.1
UDP-glucose 4-epimerase; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869: IPR013692; KEGG: bvu:BVU_1539 putative dehydratase; PFAM: polysaccharide biosynthesis protein CapD; Polysaccharide biosynthesis domain protein; PRIAM: UDP-glucose 4-epimerase; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis protein; Polysaccharide biosynthesis protein C-terminal.
  
  
 0.733
ADV44206.1
InterPro IPR019825; KEGG: ppg:PputGB1_1370 hemolytic protein HlpA-like protein; SPTR: Hemolytic protein HlpA-like protein.
  
  
 0.725
ADV44205.1
Polysaccharide biosynthesis protein; InterPro IPR002797; KEGG: bvu:BVU_3931 putative LPS biosynthesis related polysaccharide transporter/flippase; PFAM: polysaccharide biosynthesis protein; SPTR: Putative LPS biosynthesis related polysaccharide transporter/flippase; PFAM: Polysaccharide biosynthesis protein.
  
  
 0.708
ADV44214.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: bvu:BVU_1540 putative epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family.
  
  
 0.702
ADV44215.1
COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: bfr:BF1108 putative epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.494
ADV44212.1
KEGG: fsu:Fisuc_0955 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.466
ADV44213.1
Nucleotide binding protein PINc; InterPro IPR006596: IPR002850; KEGG: bvu:BVU_3921 putative nucleic acid-binding protein; SMART: Nucleotide binding protein PINc; SPTR: Putative uncharacterized protein; TIGRFAM: probable toxin-antitoxin system toxin component, PIN family.
       0.466
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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