STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44294.1InterPro IPR000866: IPR017936; KEGG: bfs:BF2390 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: AhpC/TSA family. (171 aa)    
Predicted Functional Partners:
ADV44293.1
Hypothetical protein; KEGG: dvi:Dvir_GJ20554 GJ20554 gene product from transcript GJ20554-RA; SPTR: GJ20554.
       0.631
ADV44296.1
COGs: COG0560 Phosphoserine phosphatase; InterPro IPR002912: IPR005834: IPR004469: IPR006383; KEGG: bfs:BF2389 putative phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; amino acid-binding ACT domain protein; PRIAM: Phosphoserine phosphatase; SPTR: Putative uncharacterized protein; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB.
       0.593
ADV44297.1
DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR011545: IPR001650: IPR014001: IPR000629: IPR 014021: IPR014014; KEGG: bfs:BF2388 putative ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Putative uncharacterized protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
   
   0.590
ADV42948.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG1729 conserved hypothetical protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: bfs:BF4215 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
 
    0.563
ADV42117.1
TonB family protein; InterPro IPR006260; KEGG: bfs:BF3737 putative TonB exported protein; SPTR: Putative uncharacterized protein; TIGRFAM: TonB family protein; TIGRFAM: TonB family C-terminal domain.
 
     0.550
ADV43533.1
KEGG: bfr:BF1067 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.543
ADV43526.1
KEGG: bfr:BF1047 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.542
ADV42998.1
InterPro IPR017936: IPR000866: IPR010916; KEGG: bfs:BF4128 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: AhpC/TSA family.
  
     0.490
ADV42947.1
KEGG: bth:BT_2817 putative TonB-dependent receptor; SPTR: Putative uncharacterized protein.
  
     0.482
ADV42111.1
KEGG: bfr:BF3957 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: DoxX.
  
     0.455
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.