STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44391.1KEGG: bfr:BF1566 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: MAC/Perforin domain. (307 aa)    
Predicted Functional Partners:
ADV44392.1
InterPro IPR020864; KEGG: bfr:BF1566 hypothetical protein; PFAM: Membrane attack complex component/perforin (MACPF) domain; SPTR: Putative uncharacterized protein; manually curated; PFAM: MAC/Perforin domain.
      
0.773
ADV44393.1
KEGG: bfs:BF2302 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.410
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.