STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44403.1COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: bfs:BF2282 putative two component system response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain. (242 aa)    
Predicted Functional Partners:
ADV44404.1
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR001440: IPR003594: IPR019734: IPR005467: IPR 013026; KEGG: bfs:BF2281 putative two component system sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; Tetratricopeptide TPR_1 repeat-containing protein; SMART: ATP-binding region ATPase domain protein; Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.952
ADV44402.1
AbgT transporter; COGs: COG2978 Putative p-aminobenzoyl-glutamate transporter; InterPro IPR004697; KEGG: bfs:BF2283 putative transport-related membrane protein; PFAM: AbgT transporter; SPTR: Putative uncharacterized protein; PFAM: AbgT putative transporter family; TIGRFAM: p-Aminobenzoyl-glutamate transporter family.
       0.796
ADV43542.1
KEGG: bfr:BF1077 peptidyl-prolyl cis-trans isomerase; SPTR: Putative uncharacterized protein.
  
  
 0.762
ADV44868.1
KEGG: bfs:BF3008 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.751
ADV43292.1
COGs: COG4585 Signal transduction histidine kinase; InterProIPR013026: IPR000169: IPR001440: IPR003594: IPR 019734; KEGG: bfr:BF0900 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase.
  
 
 0.749
ADV42817.1
InterPro IPR000326; KEGG: bfs:BF4354 putative transmembrane protein; PFAM: phosphoesterase PA-phosphatase related; SPTR: Putative uncharacterized protein; PFAM: PAP2 superfamily.
  
     0.712
ADV44994.1
KEGG: bfs:BF3126 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.692
ADV45270.1
GtrA family protein; InterPro IPR007267; KEGG: bth:BT_3390 hypothetical protein; PFAM: GtrA family protein; SPTR: Putative membrane protein; PFAM: GtrA-like protein.
  
     0.690
ADV43283.1
KEGG: bfr:BF0792 putative ABC transporter ATP-binding protein; SPTR: Putative uncharacterized protein.
  
   
 0.684
ADV42552.1
KEGG: bth:BT_3397 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.679
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.