STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44430.1DNA-binding protein; InterPro IPR000119: IPR005902; KEGG: bfs:BF3473 hypothetical protein; PFAM: histone family protein DNA-binding protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA-binding protein; manually curated; PFAM: Bacterial DNA-binding protein; TIGRFAM: DNA-binding protein, histone-like, putative. (161 aa)    
Predicted Functional Partners:
ADV44188.1
KEGG: pdi:BDI_1003 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA-binding protein, histone-like, putative.
  
     0.768
ADV43757.1
DNA-binding protein; InterPro IPR005902; KEGG: bth:BT_2538 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA-binding protein; TIGRFAM: DNA-binding protein, histone-like, putative.
  
     0.765
ADV45038.1
KEGG: pdi:BDI_1003 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA-binding protein, histone-like, putative.
  
     0.764
ADV43770.1
KEGG: pdi:BDI_1003 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA-binding protein, histone-like, putative.
  
     0.758
ADV44557.1
DNA-binding protein; InterPro IPR005902; KEGG: bvu:BVU_3915 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA-binding protein; TIGRFAM: DNA-binding protein, histone-like, putative.
  
     0.736
ADV44820.1
KEGG: bfs:BF1643 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.680
ADV44709.1
KEGG: bth:BT_1240 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.670
ADV42801.1
KEGG: bfs:BF0095 putative transmembrane protein; SPTR: Putative uncharacterized protein.
  
     0.648
ADV44467.1
KEGG: bfr:BF2601 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3078).
  
     0.645
ADV42817.1
InterPro IPR000326; KEGG: bfs:BF4354 putative transmembrane protein; PFAM: phosphoesterase PA-phosphatase related; SPTR: Putative uncharacterized protein; PFAM: PAP2 superfamily.
  
     0.625
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.