STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44496.1Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: bth:BT_2322 putative integrase; PFAM: integrase family protein; SPTR: Putative uncharacterized protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family. (400 aa)    
Predicted Functional Partners:
ADV43630.1
Hypothetical protein; KEGG: bfr:BF3455 tyrosine type site-specific recombinase; SPTR: Predicted protein; Belongs to the 'phage' integrase family.
  
     0.758
ADV43629.1
Hypothetical protein; KEGG: bfr:BF3455 tyrosine type site-specific recombinase; SPTR: Predicted protein.
  
     0.747
ADV43037.1
Tetracycline regulation of excision, RteC; InterPro IPR018534; KEGG: bth:BT_0110 putative regulatory protein; PFAM: Tetracycline regulation of excision, RteC; SPTR: Putative uncharacterized protein; PFAM: RteC protein.
  
     0.614
ADV43798.1
Tetracycline regulation of excision, RteC; InterPro IPR018534; KEGG: bfr:BF3844 hypothetical protein; PFAM: Tetracycline regulation of excision, RteC; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2589); RteC protein.
  
     0.600
ADV42195.1
Tetracycline regulation of excision, RteC; InterPro IPR018534; KEGG: bfs:BF1728 hypothetical protein; PFAM: Tetracycline regulation of excision, RteC; SPTR: Putative uncharacterized protein; PFAM: RteC protein.
  
     0.599
ADV42914.1
KEGG: pdi:BDI_2142 mobilization protein; SPTR: Mobilization protein.
 
   
 0.592
ADV45160.1
Hypothetical protein; KEGG: bfr:BF1988 tyrosine type site-specific recombinase; SPTR: Tyrosine type site-specific recombinase.
  
     0.539
ADV44606.1
KEGG: pdi:BDI_0746 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.531
ADV43648.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: bfs:BF1136 putative bacteriophage integrase; PFAM: integrase family protein; SPTR: Putative bacteriophage integrase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.510
ADV45105.1
KEGG: pdi:BDI_0746 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.501
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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