STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44600.1Hypothetical protein; COGs: COG0433 ATPase; KEGG: bhy:BHWA1_01315 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF87. (637 aa)    
Predicted Functional Partners:
ADV44601.1
KEGG: pct:PC1_3280 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.956
ADV44602.1
Hypothetical protein; KEGG: pvi:Cvib_0491 phosphotransferase domain-containing protein; SPTR: ABC transporter; PFAM: PHP domain.
       0.712
ADV44603.1
N-6 DNA methylase; InterPro IPR002052: IPR003356: IPR002296; KEGG: wsu:WS1930 hypothetical protein; PFAM: N-6 DNA methylase; SPTR: Putative uncharacterized protein; PFAM: N-6 DNA Methylase.
       0.477
ADV44605.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: fps:FP0735 putative DNA binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
       0.463
ADV44604.1
Protein of unknown function DUF450; InterPro IPR002052: IPR007409: IPR002296; KEGG: abi:Aboo_1333 protein of unknown function DUF450; PFAM: protein of unknown function DUF450; SPTR: Putative uncharacterized protein; PFAM: N-6 DNA Methylase; Eco57I restriction endonuclease.
       0.453
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.