STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44608.1KEGG: pdi:BDI_0743 hypothetical protein; SPTR: Putative uncharacterized protein. (124 aa)    
Predicted Functional Partners:
ADV44610.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: bth:BT_4022 integrase; PFAM: integrase family protein; SPTR: Integrase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
 
     0.874
ADV44609.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: pdi:BDI_0742 integrase; PFAM: integrase family protein; SPTR: Integrase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
 
     0.842
ADV43374.1
Phosphate-selective porin O and P; InterPro IPR010870; KEGG: bth:BT_2477 hypothetical protein; PFAM: phosphate-selective porin O and P; SPTR: Putative uncharacterized protein; PFAM: Phosphate-selective porin O and P.
  
    0.726
ADV44607.1
KEGG: pdi:BDI_0745 hypothetical protein; SPTR: DNA binding domain, excisionase family protein; TIGRFAM: DNA binding domain, excisionase family.
 
    0.665
ADV45105.1
KEGG: pdi:BDI_0746 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.622
ADV44606.1
KEGG: pdi:BDI_0746 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.609
ADV43372.1
Peptidase M75, Imelysin; InterPro IPR018976; KEGG: bth:BT_2479 iron-regulated protein A precursor; PFAM: Peptidase M75, Imelysin; SPTR: Putative uncharacterized protein; PFAM: Imelysin.
  
     0.591
ADV44274.1
KEGG: bvu:BVU_0248 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.582
ADV44275.1
KEGG: bvu:BVU_0247 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.559
ADV43814.1
KEGG: bvu:BVU_2212 putative outer membrane protein precursor; SPTR: Putative uncharacterized protein.
  
    0.556
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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