STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44681.1KEGG: bth:BT_4640 hypothetical protein; SPTR: Putative uncharacterized protein. (135 aa)    
Predicted Functional Partners:
ADV44680.1
SNARE associated Golgi protein-like protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: bvu:BVU_2704 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: Putative uncharacterized protein; PFAM: SNARE associated Golgi protein.
       0.567
ADV44679.1
COGs: COG1392 Phosphate transport regulator (distant homolog of PhoU); InterPro IPR018445; KEGG: bth:BT_4638 hypothetical protein; PFAM: Putitive phosphate transport regulator; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF47; TIGRFAM: conserved hypothetical protein TIGR00153.
       0.531
ADV44678.1
COGs: COG0306 Phosphate/sulphate permease; InterPro IPR001204; KEGG: bvu:BVU_2706 putative inorganic phosphate transporter; PFAM: phosphate transporter; SPTR: Putative uncharacterized protein; PFAM: Phosphate transporter family.
       0.517
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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