STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44880.1KEGG: bfr:BF1558 siderophore (surfactin) biosynthesis regulatory protein; SPTR: Siderophore biosynthesis regulatory protein; Belongs to the P-Pant transferase superfamily. (196 aa)    
Predicted Functional Partners:
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
     
 0.906
ADV44881.1
Gliding motility-associated protein GldE; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR019862: IPR002550: IPR000644: IPR005170; KEGG: bfs:BF1572 CorC/HlyC family transporter associated protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SPTR: Putative uncharacterized protein; TIGRFAM: gliding motility-associated protein GldE; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; TIGRFAM: gliding motility-associated protein GldE.
  
    0.844
ADV44882.1
COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344: IPR000424; KEGG: bfs:BF1571 putative single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
  
  
 0.823
ADV43338.1
Enoyl-(acyl-carrier-protein) reductase (NADH); COGs: COG0623 Enoyl-(acyl-carrier-protein); KEGG: bvu:BVU_1986 enoyl-[acyl-carrier-protein] reductase; PRIAM: Enoyl-[acyl-carrier-protein] reductase (NADH); SPTR: Putative uncharacterized protein.
 
  
 0.804
ADV42579.1
3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  
 0.776
ADV44326.1
COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR014043: IPR016160: IPR004410; KEGG: bth:BT_0789 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; SPTR: Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase.
  
  
 0.776
ADV44883.1
A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.702
ADV42510.1
KEGG: bth:BT_3446 cell division protein FtsQ; SPTR: Putative uncharacterized protein.
  
     0.699
ADV44884.1
COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: bfs:BF1568 putative histone-like DNA-binding protein HU1; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial DNA-binding protein.
       0.595
ADV42948.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG1729 conserved hypothetical protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: bfs:BF4215 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
  
     0.587
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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