STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44935.1Protein-disulfide reductase; COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR003834: IPR017936; KEGG: bfs:BF3033 putative exported cytochrome c biogenesis-related protein; PFAM: cytochrome c biogenesis protein transmembrane region; PRIAM: Protein-disulfide reductase; SPTR: Putative uncharacterized protein; PFAM: Cytochrome C biogenesis protein transmembrane region; Protein of unknown function, DUF255. (672 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.986
ADV44936.1
InterPro IPR013097; KEGG: bfs:BF3034 hypothetical protein; PFAM: Stress responsive alpha-beta barrel domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Stress responsive A/B Barrel Domain.
       0.779
ADV44934.1
COGs: COG4845 Chloramphenicol O-acetyltransferase; InterPro IPR001707; KEGG: bvu:BVU_1202 chloramphenicol acetyltransferase; PFAM: chloramphenicol acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: Chloramphenicol acetyltransferase.
       0.733
udk
COGs: COG0572 Uridine kinase; InterPro IPR000764: IPR017975; KEGG: bfs:BF3035 uridine kinase; SPTR: Uridine kinase; TIGRFAM: uridine kinase; PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase.
       0.673
ADV44938.1
COGs: COG4623 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; InterPro IPR001638: IPR008258; KEGG: bth:BT_0183 transglycosylase; PFAM: Lytic transglycosylase catalytic; extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Putative uncharacterized protein; PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3.
     
 0.669
ADV43547.1
KEGG: bth:BT_4376 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.614
ADV42791.1
KEGG: bth:BT_3247 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2723).
  
     0.579
ADV42517.1
KEGG: bth:BT_3427 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF3109).
  
     0.541
ADV44272.1
Protein of unknown function DUF450; InterPro IPR007409; KEGG: bth:BT_0887 hypothetical protein; PFAM: protein of unknown function DUF450; SPTR: Putative uncharacterized protein.
  
     0.539
ADV42968.1
Redoxin domain protein; InterPro IPR017936: IPR013740; KEGG: sli:Slin_0780 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: Putative uncharacterized protein; PFAM: Redoxin.
  
 
 0.525
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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