STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV44951.1NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: fsu:Fisuc_1718 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: Putative uncharacterized protein; PFAM: NADPH-dependent FMN reductase. (179 aa)    
Predicted Functional Partners:
ADV44952.1
COGs: COG4925 conserved hypothetical protein; KEGG: sli:Slin_2181 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.834
ADV44954.1
COGs: COG2768 Uncharacterized Fe-S center protein; KEGG: pdi:BDI_0351 uncharacterized Fe-S center protein, putative ferredoxin; SPTR: Putative uncharacterized protein.
 
     0.810
ADV44953.1
COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: pdi:BDI_1427 acetyltransferase; SPTR: Acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats).
       0.773
ADV44950.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005; KEGG: bfs:BF2137 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Putative uncharacterized protein; manually curated; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
       0.754
ADV44955.1
TonB-dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: bfr:BF4297 putative TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Putative uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
       0.567
ADV44535.1
KEGG: bth:BT_0628 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.540
ADV42644.1
COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR002177: IPR008331; KEGG: pdi:BDI_0620 non-specific DNA-binding protein Dps; PFAM: Ferritin Dps family protein; SPTR: Putative uncharacterized protein; PFAM: Ferritin-like domain; Belongs to the Dps family.
  
  
 0.516
ADV45050.1
COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: bfr:BF2074 putative NADPH-flavin oxidoreductase; PFAM: flavin reductase domain protein FMN-binding; SPTR: Flavoredoxin; PFAM: Flavin reductase like domain.
 
     0.474
ADV44949.1
COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: mmp:MMP0802 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: Iron-containing alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase.
       0.471
ADV43277.1
Hypothetical protein; InterPro IPR010916; KEGG: bth:BT_1395 hypothetical protein; SPTR: Flavodoxin; TIGRFAM: Listeria/Bacterioides repeat.
 
     0.455
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.