STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45124.1COGs: COG1538 Outer membrane protein; KEGG: sli:Slin_6956 hypothetical protein; SPTR: Predicted protein. (432 aa)    
Predicted Functional Partners:
ADV45125.1
Efflux transporter, RND family, MFP subunit; InterPro IPR006143; KEGG: sli:Slin_6955 hypothetical protein; SPTR: Predicted protein; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit.
 
 
 0.940
ADV45126.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: sli:Slin_6954 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.901
ADV45127.1
Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: cpi:Cpin_4882 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two-component system response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
   0.706
ADV43317.1
InterPro IPR003812; KEGG: gsu:GSU2183 fic family protein; PFAM: filamentation induced by cAMP protein Fic; SPTR: Fic family protein; PFAM: Fic/DOC family.
  
 
   0.676
ADV45128.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594: IPR005467; KEGG: cpi:Cpin_4883 histidine kinase; PFAM: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Twp-component sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
     0.676
ADV42139.1
Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: bfs:BF3760 hypothetical protein; PFAM: secretion protein HlyD family protein; SPTR: Putative uncharacterized protein; PFAM: HlyD family secretion protein.
  
 
 0.616
ADV44760.1
Protein of unknown function DUF891; InterPro IPR009241; KEGG: bfr:BF2944 hypothetical protein; PFAM: protein of unknown function DUF891; SPTR: Toxin-antitoxin system, toxin component, RelE family; PFAM: Phage derived protein Gp49-like (DUF891).
  
     0.458
ADV45123.1
COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006095: IPR006097: IPR006096: IPR014362; KEGG: bvu:BVU_0246 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; PRIAM: Glutamate dehydrogenase (NADP(+)); SPTR: Putative uncharacterized protein; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.456
ADV45129.1
COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: pzu:PHZ_c3264 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor domain protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
    0.453
ADV45130.1
InterPro IPR000326; KEGG: pdi:BDI_0813 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: PAP2 superfamily protein; PFAM: PAP2 superfamily.
       0.437
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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