STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45129.1COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: pzu:PHZ_c3264 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor domain protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (795 aa)    
Predicted Functional Partners:
ADV45130.1
InterPro IPR000326; KEGG: pdi:BDI_0813 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: PAP2 superfamily protein; PFAM: PAP2 superfamily.
       0.746
ADV43592.1
TonB-dependent receptor; InterPro IPR012910: IPR000531; KEGG: bfs:BF3444 hypothetical protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Membrane protein; PFAM: TonB-dependent Receptor Plug Domain.
  
    0.644
ADV42517.1
KEGG: bth:BT_3427 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF3109).
  
     0.628
ADV43029.1
KEGG: bvu:BVU_1469 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2795).
  
     0.603
ADV45128.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594: IPR005467; KEGG: cpi:Cpin_4883 histidine kinase; PFAM: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Twp-component sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
       0.582
ADV45127.1
Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: cpi:Cpin_4882 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two-component system response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
       0.578
ADV45232.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.575
ADV45126.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: sli:Slin_6954 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.545
ADV42523.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: bvu:BVU_1369 hypothetical protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent outer membrane receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.543
ADV42601.1
TonB-dependent receptor plug; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: sli:Slin_0106 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative uncharacterized protein; manually curated; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.541
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.