STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45132.1KEGG: chy:CHY_1707 hypothetical protein; SPTR: Putative uncharacterized protein. (86 aa)    
Predicted Functional Partners:
ADV42824.1
Flavodoxin; InterPro IPR008254; KEGG: bfr:BF4307 flavodoxin; SPTR: Probable flavodoxin.
 
     0.680
ADV43277.1
Hypothetical protein; InterPro IPR010916; KEGG: bth:BT_1395 hypothetical protein; SPTR: Flavodoxin; TIGRFAM: Listeria/Bacterioides repeat.
  
     0.666
ADV45131.1
Short-chain dehydrogenase/reductase SDR; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198; KEGG: amu:Amuc_1001 short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase.
 
    0.613
ADV43414.1
Domain of unknown function DUF1848; InterPro IPR014998; KEGG: str:Sterm_3587 hypothetical protein; PFAM: Domain of unknown function DUF1848; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1848).
  
    0.598
ADV43400.1
COGs: COG1453 oxidoreductase of the aldo/keto reductase family; InterPro IPR017896: IPR017900: IPR001395; KEGG: ele:Elen_1288 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Putative uncharacterized protein; PFAM: Aldo/keto reductase family.
 
    0.578
ADV45133.1
Helix-turn-helix- domain containing protein AraC type; InterPro IPR000005: IPR018060; KEGG: coc:Coch_1294 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Putative transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
  
    0.541
ADV44954.1
COGs: COG2768 Uncharacterized Fe-S center protein; KEGG: pdi:BDI_0351 uncharacterized Fe-S center protein, putative ferredoxin; SPTR: Putative uncharacterized protein.
  
    0.530
ADV45042.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895: IPR017900: IPR002880: IPR019752: IPR 019456: IPR011766: IPR017896; KEGG: bth:BT_1747 pyruvate-flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Pyruvate:ferredoxin (Flavodoxin) oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidored [...]
     
 0.521
ADV42926.1
Carboxymuconolactone decarboxylase; COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR003779; KEGG: msu:MS2158 hypothetical protein; PFAM: Carboxymuconolactone decarboxylase; SPTR: Putative uncharacterized protein; PFAM: Cupin domain; Carboxymuconolactone decarboxylase family.
 
    0.447
ADV43752.1
KEGG: bfs:BF0576 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.420
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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