STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45133.1Helix-turn-helix- domain containing protein AraC type; InterPro IPR000005: IPR018060; KEGG: coc:Coch_1294 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Putative transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (293 aa)    
Predicted Functional Partners:
ADV42905.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: bth:BT_1123 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
  
     0.741
ADV43008.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005: IPR020449; KEGG: cpi:Cpin_5975 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
  
     0.717
ADV43501.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR020449: IPR000005; KEGG: cpi:Cpin_3787 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
  
     0.698
ADV45070.1
Protein of unknown function DUF81; InterPro IPR002781; KEGG: lpj:JDM1_2547 transport protein; PFAM: protein of unknown function DUF81; SPTR: Conserved domain protein; PFAM: Sulfite exporter TauE/SafE.
  
     0.542
ADV45132.1
KEGG: chy:CHY_1707 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.541
ADV45088.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060; KEGG: bfs:BF3248 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: AraC/XylS family transcriptional regulator.
  
     0.440
ADV44174.1
COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060; KEGG: bvu:BVU_2735 transcriptional regulator; SMART: Helix-turn-helix, AraC domain; SPTR: Putative uncharacterized protein.
  
     0.436
ADV42703.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR020449: IPR013096: IPR000005: IPR018062: IPR 018060; KEGG: rbi:RB2501_01955 activator protein MtlR; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Putative uncharacterized protein; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.
  
   0.401
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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