STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45158.1KEGG: lmh:LMHCC_2631 glycosyl hydrolase, family 9; SPTR: Glycosyl hydrolase, family 9 protein; PFAM: Glycosyl hydrolase family 9; N-terminal ig-like domain of cellulase. (822 aa)    
Predicted Functional Partners:
ADV45159.1
KEGG: aba:Acid345_2907 YVTN beta-propeller repeat-containing protein; SPTR: YVTN beta-propeller repeat-containing protein; PFAM: Trehalose utilisation.
 
     0.744
ADV45160.1
Hypothetical protein; KEGG: bfr:BF1988 tyrosine type site-specific recombinase; SPTR: Tyrosine type site-specific recombinase.
       0.550
ADV44078.1
KEGG: bfs:BF1890 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.466
ADV45161.1
Hypothetical protein.
       0.412
ADV45157.1
COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006095: IPR006097: IPR006096: IPR014362; KEGG: bfs:BF3437 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; PRIAM: Glutamate dehydrogenase; SPTR: Putative uncharacterized protein; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.404
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.