STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45168.1KEGG: cce:Ccel_2338 hypothetical protein; SPTR: The GLUG motif protein family protein. (627 aa)    
Predicted Functional Partners:
ADV45167.1
KEGG: bfr:BF3846 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.693
ADV45166.1
KEGG: bfr:BF3847 hypothetical protein; SPTR: Putative uncharacterized protein.
      
0.604
ADV45165.1
KEGG: bth:BT_3148 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1812).
       0.545
ADV45164.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664: IPR006665; KEGG: bfs:BF3556 hypothetical protein; PFAM: OmpA/MotB domain protein; SPTR: Putative peptidoglycan-associated lipoprotein; PFAM: OmpA family.
  
    0.518
ADV42435.1
Hypothetical protein; KEGG: bvu:BVU_4157 putative cell surface protein; SPTR: Putative uncharacterized protein.
  
     0.496
ADV45163.1
KEGG: mrb:Mrub_0245 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.491
ADV45169.1
DNA-binding protein; InterPro IPR005902; KEGG: pdi:BDI_1732 putative non-specific DNA-binding protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA-binding protein; TIGRFAM: DNA-binding protein, histone-like, putative.
       0.476
ADV43796.1
Hypothetical protein; InterPro IPR017441; KEGG: bfr:BF3845 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.459
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.