STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45172.1TonB-dependent receptor plug; InterPro IPR012910; KEGG: pru:PRU_2228 hypothetical protein; PFAM: TonB-dependent receptor plug; SPTR: Putative uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (925 aa)    
Predicted Functional Partners:
ADV45171.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pru:PRU_2229 putative lipoprotein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: SusD family.
 
     0.961
ADV45173.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pru:PRU_2227 putative lipoprotein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.950
ADV45174.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: pru:PRU_2226 hypothetical protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
    
0.779
ADV42303.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bfs:BF2941 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.774
ADV42376.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bfs:BF2941 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.774
ADV42482.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pdi:BDI_2077 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein probably involved in nutrient binding; PFAM: SusD family.
  
     0.770
ADV44432.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bvu:BVU_0390 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: SusD/RagB family protein; PFAM: SusD family.
  
     0.767
ADV42188.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: pdi:BDI_3111 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative lipoprotein; PFAM: SusD family.
  
     0.763
ADV42675.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bvu:BVU_2228 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein, probably involved in nutrient binding; PFAM: SusD family.
  
     0.762
ADV42808.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: bvu:BVU_3711 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein, probably involved in nutrient binding; PFAM: SusD family.
 
     0.762
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.