STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45185.1KEGG: pdi:BDI_2798 hypothetical protein; SPTR: Putative uncharacterized protein. (603 aa)    
Predicted Functional Partners:
ADV45186.1
KEGG: pdi:BDI_2796 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.903
ADV45184.1
KEGG: pdi:BDI_2799 hypothetical protein; SPTR: Putative uncharacterized protein.
      
0.821
ADV44721.1
KEGG: dfe:Dfer_3749 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.730
ADV42877.1
InterPro IPR001296; KEGG: bth:BT_2937 putative glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Putative glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.717
ADV45183.1
KEGG: pdi:BDI_2800 hypothetical protein; SPTR: Putative uncharacterized protein.
      
0.699
ADV44439.1
KEGG: bfs:BF2259 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.695
ADV45187.1
KEGG: pdi:BDI_2795 putative lipoprotein; SPTR: Putative uncharacterized protein.
 
    
0.672
ADV42065.1
KEGG: bth:BT_4605 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.661
ADV44581.1
KEGG: bfs:BF2063 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Surface antigen.
  
     0.660
ADV43914.1
NGN domain-containing protein; InterPro IPR006645; KEGG: bfs:BF0731 putative transcriptional regulator; PFAM: NGN domain-containing protein; SPTR: Putative transcriptional regulator UpxY homolog; manually curated; PFAM: Transcription termination factor nusG.
  
     0.656
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.