STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45186.1KEGG: pdi:BDI_2796 hypothetical protein; SPTR: Putative uncharacterized protein. (283 aa)    
Predicted Functional Partners:
ADV45187.1
KEGG: pdi:BDI_2795 putative lipoprotein; SPTR: Putative uncharacterized protein.
 
     0.956
ADV45185.1
KEGG: pdi:BDI_2798 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.903
ADV44581.1
KEGG: bfs:BF2063 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Surface antigen.
  
     0.738
ADV45184.1
KEGG: pdi:BDI_2799 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.730
ADV45189.1
KEGG: bfs:BF3428 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.723
ADV45183.1
KEGG: pdi:BDI_2800 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.684
ADV44721.1
KEGG: dfe:Dfer_3749 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.677
ADV44785.1
KEGG: bth:BT_0417 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.600
ADV45188.1
KEGG: bfr:BF3627 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.574
ADV43649.1
DNA binding domain protein, excisionase family; InterPro IPR010093; KEGG: bfs:BF1137 putative transposase; SPTR: Putative uncharacterized protein; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.
  
     0.556
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.