STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45223.1IgA peptidase; InterPro IPR019026; KEGG: bfs:BF3526 putative lipoprotein; PFAM: Peptidase M64, IgA; SPTR: Putative uncharacterized protein; PFAM: IgA Peptidase M64. (425 aa)    
Predicted Functional Partners:
ADV45224.1
GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: bth:BT_2051 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.
       0.806
ADV45222.1
Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR000485: IPR019887: IPR019888; KEGG: bfs:BF3525 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; SPTR: Putative uncharacterized protein; PFAM: AsnC family.
       0.674
ADV44037.1
InterPro IPR008761; KEGG: bfs:BF0523 hypothetical protein; PFAM: peptidase S37 tripeptidyl aminopeptidase; SPTR: Putative uncharacterized protein; PFAM: PS-10 peptidase S37.
  
     0.508
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.