STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45255.1COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006098: IPR006159: IPR006099: IPR006158; KEGG: bth:BT_2090 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; PRIAM: Methylmalonyl-CoA mutase; SPTR: Putative uncharacterized protein; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain. (715 aa)    
Predicted Functional Partners:
ADV45256.1
COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR004608: IPR006099; KEGG: bfs:BF3593 putative methylmalonyl-CoA mutase small subunit; PFAM: methylmalonyl-CoA mutase; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase, small subunit; TIGRFAM: methylmalonyl-CoA mutase, beta subunit; PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase, heterodimeric type, beta chain.
 
0.999
ADV43686.1
methylmalonyl-CoA epimerase; InterPro IPR017515: IPR004360; KEGG: bvu:BVU_2492 lactoyl gluthatione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase.
  
 0.982
ADV43280.1
methylmalonyl-CoA mutase metallochaperone MeaB; COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129; KEGG: bth:BT_4049 arginine/ornithine transport system ATPase; PFAM: ArgK protein; SPTR: Putative uncharacterized protein; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase.
  
 0.965
ADV45042.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895: IPR017900: IPR002880: IPR019752: IPR 019456: IPR011766: IPR017896; KEGG: bth:BT_1747 pyruvate-flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Pyruvate:ferredoxin (Flavodoxin) oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidored [...]
    
 0.923
ADV45006.1
COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterPro IPR000891: IPR000089: IPR001882: IPR000150; KEGG: bth:BT_1697 pyruvate carboxylase subunit B; PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; PRIAM: Pyruvate carboxylase; SPTR: Putative uncharacterized protein; PFAM: HMGL-like; Conserved carboxylase domain; Biotin-requiring enzyme.
    
 0.917
ADV42938.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: bvu:BVU_0986 2-oxoglutarate synthase subunit KorA; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: Putative uncharacterized protein; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit.
    
 0.862
ADV44583.1
COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterPro IPR000891; KEGG: bvu:BVU_3346 pyruvate carboxylase subunit B; PFAM: pyruvate carboxyltransferase; PRIAM: Pyruvate carboxylase; SPTR: Putative uncharacterized protein; PFAM: HMGL-like; Conserved carboxylase domain.
    
 0.861
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
    
 0.857
ADV45236.1
COGs: COG0372 Citrate synthase; InterPro IPR002020; KEGG: bvu:BVU_1961 citrate synthase; PFAM: Citrate synthase; SPTR: Putative uncharacterized protein; PFAM: Citrate synthase; Belongs to the citrate synthase family.
    
 0.856
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
    
 0.855
Your Current Organism:
Bacteroides helcogenes
NCBI taxonomy Id: 693979
Other names: B. helcogenes P 36-108, Bacteroides helcogenes DSM 20613, Bacteroides helcogenes P 36-108, Bacteroides helcogenes str. P 36-108, Bacteroides helcogenes strain P 36-108
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