Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
MOC_0200Cytochrome bd2 ubiquinol oxidase, subunit II. (337 aa)    
Predicted Functional Partners:
MOC_0201
Cytochrome bd2 ubiquinol oxidase subunit I.
 
 0.999
cydA
Cytochrome bd2 ubiquinol oxidase subunit I.
 
 0.998
MOC_5615
Cytochrome bd2 ubiquinol oxidase subunit I.
 
 0.998
cydB
Cytochrome bd2 ubiquinol oxidase subunit II.
  
  
 
0.911
MOC_5616
Cytochrome bd2 ubiquinol oxidase subunit II.
  
  
 
0.902
cyoD
Cytochrome O ubiquinol oxidase subunit IV.
     
 0.613
nuoG
NADH-ubiquinone oxidoreductase chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
    
 0.610
nuoH
NADH-ubiquinone oxidoreductase chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 
 0.591
sdhC
Succinate dehydrogenase, cytochrome b556 subunit.
     
 0.580
MOC_0616
Succinate dehydrogenase, iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
     
 0.580
Your Current Organism:
Methylobacterium oryzae
NCBI taxonomy Id: 693986
Other names: M. oryzae CBMB20, Methylobacterium oryzae CBMB20, Methylobacterium oryzae str. CBMB20, Methylobacterium oryzae strain CBMB20
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