Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MOC_1027Protein of unassigned function. (63 aa)    
Predicted Functional Partners:
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
       0.866
oppB
Oligopeptide transport system permease protein OppB; Belongs to the ABC transporter superfamily.
       0.866
MOC_1026
Serine/threonine protein kinase.
       0.844
MOC_0313
Putative acyl-CoA N-acyltransferase related protein.
  
     0.680
MOC_4209
O-antigen polymerase.
  
     0.641
MOC_5318
Type IV pilus assembly PilZ.
  
     0.583
MOC_4649
Protein of unassigned function.
  
     0.582
MOC_5320
Protein of unassigned function.
  
     0.576
MOC_0845
Protein of unassigned function.
  
     0.571
MOC_4004
Protein of unassigned function.
  
     0.567
Your Current Organism:
Methylobacterium oryzae
NCBI taxonomy Id: 693986
Other names: M. oryzae CBMB20, Methylobacterium oryzae CBMB20, Methylobacterium oryzae str. CBMB20, Methylobacterium oryzae strain CBMB20
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