Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MOC_1122Short-chain dehydrogenase/reductase SDR. (336 aa)    
Predicted Functional Partners:
MOC_1121
Zn-dependent hydrolase, including glyoxylase.
  
    0.732
MOC_1123
Protein of unassigned function.
       0.581
MOC_1166
Beta-ketoacyl synthase.
  
 
 0.547
MOC_1124
AMP-dependent synthetase.
   
 
 0.509
MOC_1556
Arthrofactin/syringopeptin synthetase C-related non-ribosomal peptide synthetase.
  
  
 0.503
MOC_1427
Short-chain dehydrogenase/reductase SDR.
  
 
   0.488
MOC_4291
Short-chain dehydrogenase/reductase SDR.
  
 
   0.483
MOC_2389
Short-chain dehydrogenase/reductase SDR.
  
 
   0.475
MOC_0406
Alcohol dehydrogenase GroES domain protein.
 
   
 0.458
MOC_4431
Alcohol dehydrogenase GroES domain protein.
 
   
 0.425
Your Current Organism:
Methylobacterium oryzae
NCBI taxonomy Id: 693986
Other names: M. oryzae CBMB20, Methylobacterium oryzae CBMB20, Methylobacterium oryzae str. CBMB20, Methylobacterium oryzae strain CBMB20
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