Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MOC_2010Protein of unassigned function. (845 aa)    
Predicted Functional Partners:
MOC_2008
Transglutaminase domain-containing protein.
 
  
 0.985
MOC_2011
Transglutaminase domain-containing protein.
 
  
 0.984
MOC_0744
Transglutaminase domain-containing protein.
 
  
 0.892
MOC_6187
Transglutaminase domain-containing protein.
 
  
 0.890
MOC_3293
Transglutaminase domain protein.
 
  
 0.888
MOC_6186
Transglutaminase domain protein.
 
  
 0.847
MOC_3991
Transglutaminase domain-containing protein.
 
  
 0.846
MOC_4716
Transglutaminase-like protein.
 
  
 0.836
MOC_0745
Protein of unassigned function.
 
   
0.831
MOC_2889
Transglutaminase domain protein.
 
  
 0.825
Your Current Organism:
Methylobacterium oryzae
NCBI taxonomy Id: 693986
Other names: M. oryzae CBMB20, Methylobacterium oryzae CBMB20, Methylobacterium oryzae str. CBMB20, Methylobacterium oryzae strain CBMB20
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