Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MOC_2011Transglutaminase domain-containing protein. (299 aa)    
Predicted Functional Partners:
MOC_2010
Protein of unassigned function.
 
  
 0.984
MOC_2008
Transglutaminase domain-containing protein.
 
    
0.910
MOC_0745
Protein of unassigned function.
  
 0.865
MOC_0746
Protein of unassigned function.
 
    0.850
MOC_2007
Protein of unassigned function.
 
     0.794
MOC_2009
Protein of unassigned function.
       0.773
MOC_0743
Putative proteasome-type protease.
 
    0.550
MOC_0797
Catalase.
   
   0.405
MOC_2293
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
   0.405
Your Current Organism:
Methylobacterium oryzae
NCBI taxonomy Id: 693986
Other names: M. oryzae CBMB20, Methylobacterium oryzae CBMB20, Methylobacterium oryzae str. CBMB20, Methylobacterium oryzae strain CBMB20
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