STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MOC_2014Putative extracellular solute-binding protein. (289 aa)    
Predicted Functional Partners:
MOC_5466
ABC polar amino acid transporter inner membrane protein.
 
 
 0.782
MOC_2624
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.778
MOC_2675
Polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.769
MOC_5467
ABC polar amino acid transporter inner membrane protein.
 
 
 0.767
MOC_2625
Polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.764
MOC_5611
Polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.757
gltL
Glutamate Aspartate transport ATP-binding protein GltL.
 
 
 0.755
MOC_3714
Polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.751
MOC_2674
Polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.748
MOC_0344
Polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.739
Your Current Organism:
Methylobacterium oryzae
NCBI taxonomy Id: 693986
Other names: M. oryzae CBMB20, Methylobacterium oryzae CBMB20, Methylobacterium oryzae str. CBMB20, Methylobacterium oryzae strain CBMB20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.