Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MOC_2015Glycosyl transferase family protein. (277 aa)    
Predicted Functional Partners:
MOC_2021
Glycosyl transferase family protein.
 
     0.875
MOC_4797
Cobyrinic acid ac-diamide synthase.
  
 
 0.821
MOC_2014
Putative extracellular solute-binding protein.
 
     0.666
MOC_1098
Creatininase.
  
  
 0.638
MOC_1969
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
  
 0.621
radC
DNA repair protein RadC; Belongs to the UPF0758 family.
  
    0.611
MOC_6150
Protein of unassigned function.
  
     0.611
MOC_1090
Protein of unassigned function.
  
     0.608
MOC_0697
Protein of unassigned function.
  
     0.607
MOC_5657
Protein of unassigned function.
  
    0.605
Your Current Organism:
Methylobacterium oryzae
NCBI taxonomy Id: 693986
Other names: M. oryzae CBMB20, Methylobacterium oryzae CBMB20, Methylobacterium oryzae str. CBMB20, Methylobacterium oryzae strain CBMB20
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