STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MOC_2829Glucose-methanol-choline oxidoreductase. (547 aa)    
Predicted Functional Partners:
MOC_2262
Gluconate 2-dehydrogenase (Acceptor).
  
 
 0.790
MOC_5989
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.783
MOC_1018
Ankyrin repeat domain protein.
    
 0.704
MOC_1147
Ankyrin repeat containing putative phospholipase accessory protein.
    
 0.704
MOC_0092
WD-40 repeat-containing protein.
    
 0.691
MOC_1806
Protein of unassigned function.
    
 0.691
MOC_2828
PAS/PAC sensor hybrid histidine kinase.
     
 0.578
MOC_0133
Tetratricopeptide TPR 2 repeat protein.
    
 0.540
MOC_0441
Serine/threonine protein kinase.
    
 0.540
MOC_1282
TPR repeat-containing protein.
    
 0.540
Your Current Organism:
Methylobacterium oryzae
NCBI taxonomy Id: 693986
Other names: M. oryzae CBMB20, Methylobacterium oryzae CBMB20, Methylobacterium oryzae str. CBMB20, Methylobacterium oryzae strain CBMB20
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