Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MOC_4875Arsenical pump membrane protein. (422 aa)    
Predicted Functional Partners:
MOC_4874
Protein of unassigned function.
 
     0.855
MOC_4876
Metallophosphoesterase.
       0.748
MOC_4873
Protein of unassigned function.
 
     0.738
MOC_4872
Adenylate/guanylate cyclase.
       0.698
MOC_3936
Major facilitator superfamily MFS 1.
 
     0.523
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
    0.482
MOC_4871
Protein of unassigned function.
       0.477
arsC
Arsenate reductase.
     
 0.450
MOC_4877
Protein of unassigned function.
       0.439
guaA
GMP synthetase large subunit; Catalyzes the synthesis of GMP from XMP.
  
    0.435
Your Current Organism:
Methylobacterium oryzae
NCBI taxonomy Id: 693986
Other names: M. oryzae CBMB20, Methylobacterium oryzae CBMB20, Methylobacterium oryzae str. CBMB20, Methylobacterium oryzae strain CBMB20
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