STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001038425_01433Unannotated protein. (389 aa)    
Predicted Functional Partners:
GCA_001038425_01003
Unannotated protein.
 0.990
GCA_001038425_01002
Unannotated protein.
 0.985
GCA_001038425_01684
Unannotated protein.
 0.983
GCA_001038425_00623
Unannotated protein.
 0.965
GCA_001038425_00996
Unannotated protein.
 
 0.955
GCA_001038425_02510
Unannotated protein.
 
 0.897
GCA_001038425_03456
Unannotated protein.
 
  
 0.894
GCA_001038425_00998
Unannotated protein.
  
 0.859
GCA_001038425_00999
Unannotated protein.
 
  
 0.828
GCA_001038425_01000
Unannotated protein.
 
 
 0.827
Your Current Organism:
Ornithinibacillus contaminans
NCBI taxonomy Id: 694055
Other names: CCUG 53201, DSM 22953, O. contaminans, Ornithinibacillus contaminans Kampfer et al. 2010, Ornithinibacillus sp. CCUG 53201
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.