STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001038425_02360Unannotated protein. (609 aa)    
Predicted Functional Partners:
GCA_001038425_01948
Unannotated protein.
  
  
 0.824
GCA_001038425_02321
Unannotated protein.
  
  
 0.782
GCA_001038425_01761
Unannotated protein.
   
    0.773
GCA_001038425_01544
Unannotated protein.
  
  
 0.749
GCA_001038425_00880
Unannotated protein.
  
  
 0.718
GCA_001038425_01770
Unannotated protein.
   
  
0.680
GCA_001038425_01765
Unannotated protein.
  
  
 0.678
GCA_001038425_01774
Unannotated protein.
   
  
 0.668
GCA_001038425_01806
Unannotated protein.
   
    0.666
GCA_001038425_00881
Unannotated protein.
   
    0.663
Your Current Organism:
Ornithinibacillus contaminans
NCBI taxonomy Id: 694055
Other names: CCUG 53201, DSM 22953, O. contaminans, Ornithinibacillus contaminans Kampfer et al. 2010, Ornithinibacillus sp. CCUG 53201
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.