STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001038425_02933Unannotated protein. (456 aa)    
Predicted Functional Partners:
GCA_001038425_00942
Unannotated protein.
   
 
  0.763
GCA_001038425_00937
Unannotated protein.
    
  0.759
GCA_001038425_00784
Unannotated protein.
   
 
 0.685
GCA_001038425_02934
Unannotated protein.
       0.577
GCA_001038425_00558
Unannotated protein.
   
    0.485
GCA_001038425_03385
Unannotated protein.
   
    0.485
GCA_001038425_01548
Unannotated protein.
   
    0.468
GCA_001038425_02250
Unannotated protein.
   
    0.468
GCA_001038425_01789
Unannotated protein.
     
 0.421
GCA_001038425_02884
Unannotated protein.
  
     0.412
Your Current Organism:
Ornithinibacillus contaminans
NCBI taxonomy Id: 694055
Other names: CCUG 53201, DSM 22953, O. contaminans, Ornithinibacillus contaminans Kampfer et al. 2010, Ornithinibacillus sp. CCUG 53201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.