STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_0010Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit. (180 aa)    
Predicted Functional Partners:
DFW101_0011
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit.
 
 0.999
DFW101_0012
Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.970
DFW101_0007
Malic protein NAD-binding.
 
 
 0.969
DFW101_0013
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit.
  
 
 0.939
DFW101_0034
Succinate--CoA ligase (ADP-forming).
  
 
 0.921
DFW101_0014
Succinate dehydrogenase cytochrome b subunit.
  
 
 0.918
DFW101_1870
Adenylylsulfate reductase, alpha subunit.
  
 
 0.864
DFW101_0008
Glutamate synthase (NADPH), homotetrameric.
    
 0.849
DFW101_1495
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.833
DFW101_0602
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.815
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.