STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_0165Transcriptional regulator, MarR family. (156 aa)    
Predicted Functional Partners:
DFW101_0164
PBS lyase HEAT domain protein repeat-containing protein.
       0.646
DFW101_3269
Glycosyl transferase family 2.
  
 
 0.595
DFW101_2181
Glyoxalase/bleomycin resistance protein/dioxygenase.
    
 0.572
mtnA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
  
  
  0.558
DFW101_1586
Uncharacterized protein.
    
 0.550
DFW101_2339
Acyl-CoA dehydrogenase domain-containing protein.
   
 
 0.545
DFW101_2704
Riboflavin synthase, alpha subunit.
  
 
 0.530
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.528
DFW101_2486
Ketose-bisphosphate aldolase class-II.
     
 0.527
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
     
 0.518
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.