STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_0443Cobyrinic acid ac-diamide synthase. (276 aa)    
Predicted Functional Partners:
DFW101_0835
GTP-binding signal recognition particle SRP54 G-domain protein.
 
 
 0.993
DFW101_0522
Flagellar motor switch protein FliM.
 
  
 0.876
DFW101_0444
Diguanylate cyclase.
  
 
 0.864
DFW101_2564
Flagellar motor switch protein FliG.
 
  
 0.858
DFW101_0067
Two component, sigma54 specific, transcriptional regulator, Fis family.
  
 0.815
DFW101_0082
Putative two component, sigma54 specific, transcriptional regulator.
  
 0.815
DFW101_0094
Two component, sigma54 specific, transcriptional regulator, Fis family.
  
 0.815
DFW101_0207
Two component, sigma54 specific, transcriptional regulator, Fis family.
  
 0.815
DFW101_0240
Two component, sigma54 specific, transcriptional regulator, Fis family.
  
 0.815
DFW101_0695
Putative two component, sigma54 specific, transcriptional regulator.
  
 0.815
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.