STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_0461Methyltransferase type 11. (272 aa)    
Predicted Functional Partners:
DFW101_0462
Uncharacterized protein.
       0.752
DFW101_2692
Methyltransferase type 11.
 
 0.717
DFW101_1617
SNARE associated golgi family protein.
  
 
 0.683
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
 
 0.681
DFW101_2597
Radical SAM domain protein.
  
 
 0.681
DFW101_2601
NADH dehydrogenase (Quinone).
    
 0.677
DFW101_2845
Beta-ketoacyl synthase.
    
 0.653
DFW101_3382
Phosphoserine phosphatase SerB.
   
  0.649
DFW101_1221
Methionine synthase.
    
 0.645
DFW101_0944
FAD dependent oxidoreductase.
  
 0.632
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.