STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_0532DDE_Tnp_IS1595 domain-containing protein. (286 aa)    
Predicted Functional Partners:
DFW101_0528
Formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
     0.869
mobA
Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
       0.753
moaA
GTP 3',8-cyclase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.753
DFW101_0529
Formate dehydrogenase subunit FdhD.
       0.751
DFW101_2392
Uncharacterized protein.
  
     0.746
DFW101_1697
Uncharacterized protein.
  
     0.739
DFW101_0536
Multi-sensor signal transduction histidine kinase.
 
     0.738
DFW101_2565
Flagellar assembly protein FliH/Type III secretion system HrpE.
  
     0.706
DFW101_0161
TPR_REGION domain-containing protein.
  
     0.686
DFW101_0220
Flagellar hook-length control protein-like protein.
  
     0.686
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.