STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_0534Formate dehydrogenase beta subunit. (240 aa)    
Predicted Functional Partners:
DFW101_0533
Formate dehydrogenase, alpha subunit.
 
 0.996
DFW101_1497
Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.994
DFW101_1275
Cytochrome c, class III, conserved region.
 
 
 0.962
DFW101_1791
Cytochrome c family protein.
  
 0.958
DFW101_1725
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.954
DFW101_3097
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.951
DFW101_0368
Polysulfide reductase NrfD.
 0.944
DFW101_1274
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.942
DFW101_0021
Cytochrome b/b6 domain protein.
  
 0.940
DFW101_1272
Molybdopterin oxidoreductase membrane subunit.
 0.940
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.