STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_0589Acyltransferase 3. (357 aa)    
Predicted Functional Partners:
DFW101_0588
Universal stress protein.
       0.541
DFW101_3306
Von Willebrand factor type A.
  
     0.522
DFW101_0503
Glycosyl transferase family 2.
 
   
 0.510
DFW101_2680
Uncharacterized protein.
 
   
 0.508
DFW101_3173
Metallophosphoesterase.
 
     0.506
DFW101_0590
2-isopropylmalate synthase/homocitrate synthase family protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.
       0.476
DFW101_2080
Glycosyl transferase family 2.
 
   
 0.462
DFW101_2948
N-6 DNA methylase.
   
    0.459
DFW101_0575
Nuclease (SNase domain-containing protein).
   
  
 0.448
DFW101_3516
Nuclease (SNase domain-containing protein).
   
  
 0.448
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.