STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_0727DsrE family protein. (113 aa)    
Predicted Functional Partners:
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
   
   0.922
DFW101_1227
Fructose-1,6-bisphosphatase.
    
   0.762
DFW101_0723
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
       0.697
DFW101_0724
Xenobiotic-transporting ATPase.
       0.697
DFW101_0725
Uncharacterized protein.
       0.697
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
       0.697
DFW101_1682
NADPH-dependent FMN reductase.
    
  0.568
DFW101_2169
NAD(P)H dehydrogenase (quinone).
    
  0.568
DFW101_2989
NADPH-dependent FMN reductase.
    
  0.568
DFW101_3168
NADPH-dependent FMN reductase.
    
  0.568
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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